Source code for pyhf.modifiers.normsys

import logging

from pyhf import events, get_backend, interpolators
from pyhf.parameters import ParamViewer

log = logging.getLogger(__name__)


[docs] def required_parset(_sample_data, _modifier_data): return { "paramset_type": "constrained_by_normal", "n_parameters": 1, "is_scalar": True, "inits": (0.0,), "bounds": ((-5.0, 5.0),), "fixed": False, "auxdata": (0.0,), }
[docs] class normsys_builder: """Builder class for collecting normsys modifier data""" is_shared = True
[docs] def __init__(self, config): self.builder_data = {} self.config = config self.required_parsets = {}
[docs] def collect(self, thismod, nom): maskval = bool(thismod) lo_factor = thismod["data"]["lo"] if thismod else 1.0 hi_factor = thismod["data"]["hi"] if thismod else 1.0 nom_data = [1.0] * len(nom) lo = [lo_factor] * len(nom) # broadcasting hi = [hi_factor] * len(nom) mask = [maskval] * len(nom) return {"lo": lo, "hi": hi, "mask": mask, "nom_data": nom_data}
[docs] def append(self, key, channel, sample, thismod, defined_samp): self.builder_data.setdefault(key, {}).setdefault(sample, {}).setdefault( "data", {"hi": [], "lo": [], "nom_data": [], "mask": []} ) nom = ( defined_samp["data"] if defined_samp else [0.0] * self.config.channel_nbins[channel] ) moddata = self.collect(thismod, nom) self.builder_data[key][sample]["data"]["nom_data"] += moddata["nom_data"] self.builder_data[key][sample]["data"]["lo"] += moddata["lo"] self.builder_data[key][sample]["data"]["hi"] += moddata["hi"] self.builder_data[key][sample]["data"]["mask"] += moddata["mask"] if thismod: self.required_parsets.setdefault( thismod["name"], [required_parset(defined_samp["data"], thismod["data"])], )
[docs] def finalize(self): return self.builder_data
[docs] class normsys_combined: name = "normsys" op_code = "multiplication"
[docs] def __init__( self, modifiers, pdfconfig, builder_data, interpcode="code1", batch_size=None ): self.interpcode = interpcode assert self.interpcode in ["code1", "code4"] keys = [f"{mtype}/{m}" for m, mtype in modifiers] normsys_mods = [m for m, _ in modifiers] self.batch_size = batch_size parfield_shape = ( (self.batch_size, pdfconfig.npars) if self.batch_size else (pdfconfig.npars,) ) self.param_viewer = ParamViewer(parfield_shape, pdfconfig.par_map, normsys_mods) self._normsys_histoset = [ [ [ builder_data[m][s]["data"]["lo"], builder_data[m][s]["data"]["nom_data"], builder_data[m][s]["data"]["hi"], ] for s in pdfconfig.samples ] for m in keys ] self._normsys_mask = [ [[builder_data[m][s]["data"]["mask"]] for s in pdfconfig.samples] for m in keys ] if normsys_mods: self.interpolator = getattr(interpolators, self.interpcode)( self._normsys_histoset ) self._precompute() events.subscribe("tensorlib_changed")(self._precompute)
[docs] def _precompute(self): if not self.param_viewer.index_selection: return tensorlib, _ = get_backend() self.normsys_mask = tensorlib.tile( tensorlib.astensor(self._normsys_mask, dtype="bool"), (1, 1, self.batch_size or 1, 1), ) self.normsys_default = tensorlib.ones(self.normsys_mask.shape) if self.batch_size is None: self.indices = tensorlib.reshape( self.param_viewer.indices_concatenated, (-1, 1) )
[docs] def apply(self, pars): """ Returns: modification tensor: Shape (n_modifiers, n_global_samples, n_alphas, n_global_bin) """ if not self.param_viewer.index_selection: return None tensorlib, _ = get_backend() if self.batch_size is None: normsys_alphaset = self.param_viewer.get(pars, self.indices) else: normsys_alphaset = self.param_viewer.get(pars) results_norm = self.interpolator(normsys_alphaset) # either rely on numerical no-op or force with line below return tensorlib.where(self.normsys_mask, results_norm, self.normsys_default)